Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.39□□□□□ -0.59
Cdh4P39038 Gm270-201ENSMUST00000223010 976 ntBASIC11.39□□□□□ -0.59
Cdh4P39038 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Cdh4P39038 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdh4P39038 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cdh4P39038 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdh4P39038 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh4P39038 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.38□□□□□ -0.59
Cdh4P39038 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Map1b-203ENSMUST00000223725 2669 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm12266-201ENSMUST00000120311 962 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Gm11660-201ENSMUST00000120955 412 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm28450-201ENSMUST00000187349 638 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm5705-201ENSMUST00000066241 711 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Cdh4P39038 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.38□□□□□ -0.59
Cdh4P39038 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh4P39038 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cdh4P39038 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cdh4P39038 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.37□□□□□ -0.59
Cdh4P39038 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.37□□□□□ -0.59
Cdh4P39038 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.37□□□□□ -0.59
Cdh4P39038 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Gm17040-202ENSMUST00000170597 889 ntBASIC11.37□□□□□ -0.59
Cdh4P39038 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Gm16505-201ENSMUST00000179981 232 ntBASIC11.37□□□□□ -0.59
Cdh4P39038 Gm19208-201ENSMUST00000213861 912 ntBASIC11.37□□□□□ -0.59
Cdh4P39038 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms