Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Upk2P38575 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Upk2P38575 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Upk2P38575 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
Upk2P38575 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.39□□□□□ -0.75
Upk2P38575 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
Upk2P38575 Gm8343-201ENSMUST00000182705 994 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm29615-201ENSMUST00000185371 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm28224-201ENSMUST00000186078 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Gm29001-201ENSMUST00000186177 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm28292-201ENSMUST00000186593 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm28101-201ENSMUST00000187608 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm29076-201ENSMUST00000187689 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm28302-201ENSMUST00000187931 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm28646-201ENSMUST00000188220 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm28205-201ENSMUST00000189177 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm29032-201ENSMUST00000189797 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm28695-201ENSMUST00000190300 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm37448-201ENSMUST00000192795 697 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm4157-201ENSMUST00000211647 679 ntBASIC10.39□□□□□ -0.75
Upk2P38575 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Upk2P38575 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Upk2P38575 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk2P38575 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Upk2P38575 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Upk2P38575 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.38□□□□□ -0.75
Upk2P38575 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Upk2P38575 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.38□□□□□ -0.75
Upk2P38575 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.38□□□□□ -0.75
Upk2P38575 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.38□□□□□ -0.75
Upk2P38575 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.38□□□□□ -0.75
Upk2P38575 Gm8913-201ENSMUST00000209491 641 ntBASIC10.38□□□□□ -0.75
Upk2P38575 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.38□□□□□ -0.75
Upk2P38575 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Upk2P38575 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Upk2P38575 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Upk2P38575 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms