Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp4P35123 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp4P35123 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp4P35123 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Usp4P35123 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Gm13736-201ENSMUST00000119272 253 ntBASIC12.44□□□□□ -0.42
Usp4P35123 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp4P35123 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Usp4P35123 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp4P35123 Gm2383-201ENSMUST00000181461 807 ntBASIC12.44□□□□□ -0.42
Usp4P35123 Gm44405-201ENSMUST00000198952 126 ntBASIC12.44□□□□□ -0.42
Usp4P35123 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.44□□□□□ -0.42
Usp4P35123 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp4P35123 Gm10076-201ENSMUST00000073238 384 ntBASIC12.44□□□□□ -0.42
Usp4P35123 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp4P35123 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.44□□□□□ -0.42
Usp4P35123 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.44□□□□□ -0.42
Usp4P35123 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.44□□□□□ -0.42
Usp4P35123 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp4P35123 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp4P35123 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.44□□□□□ -0.42
Usp4P35123 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.43□□□□□ -0.42
Usp4P35123 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp4P35123 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Gm8738-201ENSMUST00000172606 329 ntBASIC12.43□□□□□ -0.42
Usp4P35123 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.43□□□□□ -0.42
Usp4P35123 Gm26956-201ENSMUST00000182176 986 ntBASIC12.43□□□□□ -0.42
Usp4P35123 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.43□□□□□ -0.42
Usp4P35123 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.43□□□□□ -0.42
Usp4P35123 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.43□□□□□ -0.42
Usp4P35123 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp4P35123 Gm5363-201ENSMUST00000211927 938 ntBASIC12.43□□□□□ -0.42
Usp4P35123 Gm45925-201ENSMUST00000218882 744 ntBASIC12.43□□□□□ -0.42
Usp4P35123 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.43□□□□□ -0.42
Usp4P35123 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp4P35123 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp4P35123 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Usp4P35123 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp4P35123 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.43□□□□□ -0.42
Usp4P35123 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp4P35123 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Usp4P35123 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp4P35123 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.42□□□□□ -0.42
Usp4P35123 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp4P35123 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp4P35123 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Usp4P35123 Gm18753-201ENSMUST00000201000 566 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms