Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.28□□□□□ -0.28
Nedd1P33215 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nedd1P33215 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Gm11956-201ENSMUST00000119525 512 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.28□□□□□ -0.28
Nedd1P33215 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Gm12407-201ENSMUST00000180219 324 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Nedd1P33215 Gm45118-201ENSMUST00000208928 825 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.28□□□□□ -0.28
Nedd1P33215 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.28□□□□□ -0.28
Nedd1P33215 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nedd1P33215 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Nedd1P33215 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nedd1P33215 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.28□□□□□ -0.28
Nedd1P33215 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd1P33215 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd1P33215 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd1P33215 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.27□□□□□ -0.28
Nedd1P33215 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd1P33215 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd1P33215 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd1P33215 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd1P33215 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Nedd1P33215 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd1P33215 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nedd1P33215 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.27□□□□□ -0.29
Nedd1P33215 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 Gm22902-201ENSMUST00000158488 302 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Nedd1P33215 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.27□□□□□ -0.29
Nedd1P33215 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 Gm17831-201ENSMUST00000205579 900 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.27□□□□□ -0.29
Nedd1P33215 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.27□□□□□ -0.29
Nedd1P33215 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.27□□□□□ -0.29
Nedd1P33215 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.27□□□□□ -0.29
Nedd1P33215 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nedd1P33215 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Nedd1P33215 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nedd1P33215 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nedd1P33215 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.27□□□□□ -0.29
Nedd1P33215 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd1P33215 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nedd1P33215 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd1P33215 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd1P33215 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd1P33215 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nedd1P33215 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.26□□□□□ -0.29
Nedd1P33215 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd1P33215 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd1P33215 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.26□□□□□ -0.29
Nedd1P33215 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nedd1P33215 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd1P33215 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.26□□□□□ -0.29
Nedd1P33215 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.26□□□□□ -0.29
Nedd1P33215 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.26□□□□□ -0.29
Nedd1P33215 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd1P33215 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms