Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm23596-201ENSMUST00000104304 132 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm11509-201ENSMUST00000117358 325 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm12266-201ENSMUST00000120311 962 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm17040-202ENSMUST00000170597 889 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Mir6927-201ENSMUST00000184494 71 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm9797-202ENSMUST00000218003 294 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm9072-201ENSMUST00000218390 1514 ntBASIC11□□□□□ -0.65
Tnfrsf1bP25119 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm12217-201ENSMUST00000118858 696 ntBASIC11□□□□□ -0.65
Tnfrsf1bP25119 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11□□□□□ -0.65
Tnfrsf1bP25119 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm43807-201ENSMUST00000200678 1781 ntBASIC11□□□□□ -0.65
Tnfrsf1bP25119 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11□□□□□ -0.65
Tnfrsf1bP25119 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1bP25119 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Gm23200-201ENSMUST00000104379 132 ntBASIC10.99□□□□□ -0.65
Tnfrsf1bP25119 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms