Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Mir7686-201ENSMUST00000200604 57 ntBASIC13.01□□□□□ -0.33
Pde6bP23440 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.01□□□□□ -0.33
Pde6bP23440 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.01□□□□□ -0.33
Pde6bP23440 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Gm5705-201ENSMUST00000066241 711 ntBASIC13.01□□□□□ -0.33
Pde6bP23440 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.01□□□□□ -0.33
Pde6bP23440 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.01□□□□□ -0.33
Pde6bP23440 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.01□□□□□ -0.33
Pde6bP23440 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.01□□□□□ -0.33
Pde6bP23440 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Cog3-203ENSMUST00000227473 4197 ntBASIC13.01□□□□□ -0.33
Pde6bP23440 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pde6bP23440 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Gm38385-201ENSMUST00000194454 2351 ntBASIC13□□□□□ -0.33
Pde6bP23440 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Gm14314-201ENSMUST00000118225 1015 ntBASIC13□□□□□ -0.33
Pde6bP23440 Gm14460-201ENSMUST00000121511 639 ntBASIC13□□□□□ -0.33
Pde6bP23440 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13□□□□□ -0.33
Pde6bP23440 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13□□□□□ -0.33
Pde6bP23440 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pde6bP23440 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pde6bP23440 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Gm8285-201ENSMUST00000208293 759 ntBASIC13□□□□□ -0.33
Pde6bP23440 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Gm45550-201ENSMUST00000209380 946 ntBASIC13□□□□□ -0.33
Pde6bP23440 Gm9797-202ENSMUST00000218003 294 ntBASIC13□□□□□ -0.33
Pde6bP23440 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 CT030637.1-201ENSMUST00000228016 669 ntBASIC13□□□□□ -0.33
Pde6bP23440 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Pde6bP23440 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pde6bP23440 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pde6bP23440 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pde6bP23440 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Pde6bP23440 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Pde6bP23440 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pde6bP23440 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms