Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.74□□□□□ -0.21
Col1a1P11087 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col1a1P11087 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col1a1P11087 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col1a1P11087 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col1a1P11087 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col1a1P11087 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.74□□□□□ -0.21
Col1a1P11087 Gm22594-201ENSMUST00000104251 130 ntBASIC13.74□□□□□ -0.21
Col1a1P11087 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col1a1P11087 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.74□□□□□ -0.21
Col1a1P11087 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Col1a1P11087 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col1a1P11087 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.74□□□□□ -0.21
Col1a1P11087 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.74□□□□□ -0.21
Col1a1P11087 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.74□□□□□ -0.21
Col1a1P11087 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col1a1P11087 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.74□□□□□ -0.21
Col1a1P11087 Gm8181-201ENSMUST00000062242 669 ntBASIC13.74□□□□□ -0.21
Col1a1P11087 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col1a1P11087 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col1a1P11087 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.73□□□□□ -0.21
Col1a1P11087 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col1a1P11087 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.73□□□□□ -0.21
Col1a1P11087 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.73□□□□□ -0.21
Col1a1P11087 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Gm25604-201ENSMUST00000158359 133 ntBASIC13.73□□□□□ -0.21
Col1a1P11087 Gm20495-201ENSMUST00000173902 235 ntBASIC13.73□□□□□ -0.21
Col1a1P11087 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.73□□□□□ -0.21
Col1a1P11087 Gm5700-201ENSMUST00000191483 989 ntBASIC13.73□□□□□ -0.21
Col1a1P11087 Gm37852-201ENSMUST00000193027 350 ntBASIC13.73□□□□□ -0.21
Col1a1P11087 Gm37284-201ENSMUST00000193607 539 ntBASIC13.73□□□□□ -0.21
Col1a1P11087 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col1a1P11087 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col1a1P11087 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.73□□□□□ -0.21
Col1a1P11087 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.73□□□□□ -0.21
Col1a1P11087 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col1a1P11087 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Col1a1P11087 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm15197-201ENSMUST00000120526 478 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm18035-201ENSMUST00000211962 589 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm26670-202ENSMUST00000226862 340 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.72□□□□□ -0.21
Col1a1P11087 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.72□□□□□ -0.21
Col1a1P11087 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col1a1P11087 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col1a1P11087 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col1a1P11087 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col1a1P11087 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col1a1P11087 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col1a1P11087 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col1a1P11087 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Col1a1P11087 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col1a1P11087 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.71□□□□□ -0.21
Col1a1P11087 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.71□□□□□ -0.21
Col1a1P11087 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col1a1P11087 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col1a1P11087 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms