Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Gm11560-201ENSMUST00000117567 948 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC15.11■□□□□ 0.01
Ubr1O70481 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Gm3329-201ENSMUST00000159873 556 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm4982-201ENSMUST00000160440 1098 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm5621-201ENSMUST00000187303 640 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC15.11■□□□□ 0.01
Ubr1O70481 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC15.11■□□□□ 0.01
Ubr1O70481 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC15.11■□□□□ 0.01
Ubr1O70481 CT025618.1-203ENSMUST00000227008 589 ntBASIC15.11■□□□□ 0.01
Ubr1O70481 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ubr1O70481 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ubr1O70481 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubr1O70481 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.1■□□□□ 0.01
Ubr1O70481 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC15.1■□□□□ 0.01
Ubr1O70481 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Gm13422-201ENSMUST00000118834 504 ntBASIC15.1■□□□□ 0.01
Ubr1O70481 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC15.1■□□□□ 0.01
Ubr1O70481 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Gm44216-201ENSMUST00000203942 157 ntBASIC15.1■□□□□ 0.01
Ubr1O70481 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC15.1■□□□□ 0.01
Ubr1O70481 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 AC140375.1-201ENSMUST00000225421 694 ntBASIC15.1■□□□□ 0.01
Ubr1O70481 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubr1O70481 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.1■□□□□ 0.01
Ubr1O70481 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubr1O70481 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ubr1O70481 Gm13135-201ENSMUST00000117628 3121 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.09■□□□□ 0.01
Ubr1O70481 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ubr1O70481 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ubr1O70481 Mir7035-201ENSMUST00000184713 82 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ubr1O70481 Gm5700-201ENSMUST00000191483 989 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 Gm44647-201ENSMUST00000207402 428 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 Gm18204-201ENSMUST00000209835 793 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 AC115304.2-201ENSMUST00000226399 332 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ubr1O70481 Gm43102-201ENSMUST00000201004 2324 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.09■□□□□ 0.01
Ubr1O70481 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.09■□□□□ 0.01
Ubr1O70481 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubr1O70481 Gm24791-201ENSMUST00000104284 131 ntBASIC15.08■□□□□ 0.01
Ubr1O70481 Gm14274-201ENSMUST00000117182 615 ntBASIC15.08■□□□□ 0.01
Ubr1O70481 Gm11578-201ENSMUST00000118530 459 ntBASIC15.08■□□□□ 0.01
Ubr1O70481 Gm13019-201ENSMUST00000120000 276 ntBASIC15.08■□□□□ 0.01
Ubr1O70481 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0.01
Ubr1O70481 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ubr1O70481 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC15.08■□□□□ 0.01
Ubr1O70481 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.08■□□□□ 0.01
Ubr1O70481 Gm9353-201ENSMUST00000200472 604 ntBASIC15.08■□□□□ 0.01
Ubr1O70481 Gm44814-201ENSMUST00000207018 434 ntBASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 141.6 ms