Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 AU022133-201ENSMUST00000200601 873 ntBASIC11.76□□□□□ -0.53
Pdlim1O70400 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.76□□□□□ -0.53
Pdlim1O70400 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.76□□□□□ -0.53
Pdlim1O70400 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim1O70400 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.76□□□□□ -0.53
Pdlim1O70400 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim1O70400 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Pdlim1O70400 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Pdlim1O70400 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.76□□□□□ -0.53
Pdlim1O70400 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm11663-201ENSMUST00000117888 290 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm4909-201ENSMUST00000118749 794 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm8566-201ENSMUST00000120174 465 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.75□□□□□ -0.53
Pdlim1O70400 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm25881-201ENSMUST00000157783 103 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm23085-201ENSMUST00000157849 293 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm27552-201ENSMUST00000183351 62 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm27844-201ENSMUST00000183613 62 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm6450-201ENSMUST00000200896 574 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm21811-201ENSMUST00000096485 930 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.75□□□□□ -0.53
Pdlim1O70400 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim1O70400 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim1O70400 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Pdlim1O70400 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.74□□□□□ -0.53
Pdlim1O70400 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.74□□□□□ -0.53
Pdlim1O70400 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.74□□□□□ -0.53
Pdlim1O70400 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdlim1O70400 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pdlim1O70400 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.74□□□□□ -0.53
Pdlim1O70400 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms