Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Npc1O35604 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.6□□□□□ -0.55
Npc1O35604 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Npc1O35604 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Npc1O35604 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Npc1O35604 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Npc1O35604 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
Npc1O35604 Gm23200-201ENSMUST00000104379 132 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Mir5132-201ENSMUST00000175166 71 ntBASIC11.59□□□□□ -0.55
Npc1O35604 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Gm5705-201ENSMUST00000066241 711 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Gm21811-201ENSMUST00000096485 930 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Npc1O35604 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.59□□□□□ -0.55
Npc1O35604 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.59□□□□□ -0.55
Npc1O35604 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npc1O35604 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Npc1O35604 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.58□□□□□ -0.56
Npc1O35604 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Npc1O35604 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Gm23596-201ENSMUST00000104304 132 ntBASIC11.58□□□□□ -0.56
Npc1O35604 Gm14724-201ENSMUST00000118400 537 ntBASIC11.58□□□□□ -0.56
Npc1O35604 Gm5419-201ENSMUST00000119301 527 ntBASIC11.58□□□□□ -0.56
Npc1O35604 Gm23085-201ENSMUST00000157849 293 ntBASIC11.58□□□□□ -0.56
Npc1O35604 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.58□□□□□ -0.56
Npc1O35604 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.58□□□□□ -0.56
Npc1O35604 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.58□□□□□ -0.56
Npc1O35604 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.58□□□□□ -0.56
Npc1O35604 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.58□□□□□ -0.56
Npc1O35604 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms