Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm5700-201ENSMUST00000191483 989 ntBASIC17.92■□□□□ 0.46
Polr1aO35134 AC162932.1-201ENSMUST00000219209 872 ntBASIC17.92■□□□□ 0.46
Polr1aO35134 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC17.92■□□□□ 0.46
Polr1aO35134 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Polr1aO35134 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Polr1aO35134 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr1aO35134 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr1aO35134 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr1aO35134 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Polr1aO35134 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Polr1aO35134 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC17.91■□□□□ 0.46
Polr1aO35134 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Gm45085-201ENSMUST00000209100 441 ntBASIC17.91■□□□□ 0.46
Polr1aO35134 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC17.91■□□□□ 0.46
Polr1aO35134 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr1aO35134 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Polr1aO35134 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.9■□□□□ 0.46
Polr1aO35134 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC17.9■□□□□ 0.46
Polr1aO35134 Gm43463-201ENSMUST00000195967 1803 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 Gm22594-201ENSMUST00000104251 130 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 Gm16167-201ENSMUST00000160428 1065 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 Gm19246-201ENSMUST00000173599 255 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Gm37852-201ENSMUST00000193027 350 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 Gm42660-201ENSMUST00000197733 947 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.9■□□□□ 0.46
Polr1aO35134 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Polr1aO35134 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Gm5740-201ENSMUST00000211003 1857 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 CT010447.1-201ENSMUST00000225657 1608 ntBASIC17.9■□□□□ 0.46
Polr1aO35134 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr1aO35134 Gm45416-201ENSMUST00000209713 2201 ntBASIC17.89■□□□□ 0.46
Polr1aO35134 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC17.89■□□□□ 0.46
Polr1aO35134 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Polr1aO35134 Snord23-201ENSMUST00000116828 109 ntBASIC17.89■□□□□ 0.46
Polr1aO35134 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC17.89■□□□□ 0.46
Polr1aO35134 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Polr1aO35134 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Polr1aO35134 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Polr1aO35134 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Polr1aO35134 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Polr1aO35134 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.89■□□□□ 0.45
Polr1aO35134 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Polr1aO35134 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Polr1aO35134 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Gm37651-201ENSMUST00000194679 1494 ntBASIC17.89■□□□□ 0.45
Polr1aO35134 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Polr1aO35134 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Gm5555-201ENSMUST00000120352 1111 ntBASIC17.89■□□□□ 0.45
Polr1aO35134 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC17.89■□□□□ 0.45
Polr1aO35134 Gm27956-201ENSMUST00000175604 260 ntBASIC17.89■□□□□ 0.45
Polr1aO35134 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC17.89■□□□□ 0.45
Polr1aO35134 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC17.89■□□□□ 0.45
Polr1aO35134 Gm42779-201ENSMUST00000198807 406 ntBASIC17.89■□□□□ 0.45
Polr1aO35134 Gm43966-201ENSMUST00000203301 612 ntBASIC17.89■□□□□ 0.45
Polr1aO35134 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC17.89■□□□□ 0.45
Polr1aO35134 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Gm42943-201ENSMUST00000199676 3242 ntBASIC17.89■□□□□ 0.45
Polr1aO35134 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr1aO35134 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Polr1aO35134 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms