Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.79□□□□□ -0.68
Shisa8J3QNX5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Gm5035-201ENSMUST00000215581 927 ntBASIC10.79□□□□□ -0.68
Shisa8J3QNX5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Gm8420-201ENSMUST00000097103 598 ntBASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.79□□□□□ -0.68
Shisa8J3QNX5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Shisa8J3QNX5 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Gm5706-201ENSMUST00000181525 993 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 BC043934-202ENSMUST00000185694 2356 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms