Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
R3hdm1E9Q9Q2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
R3hdm1E9Q9Q2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Mir8115-201ENSMUST00000184992 119 ntBASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm17877-201ENSMUST00000192578 814 ntBASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm2875-201ENSMUST00000211333 360 ntBASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm9111-201ENSMUST00000219394 709 ntBASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.12□□□□□ -0.31
R3hdm1E9Q9Q2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Map1b-203ENSMUST00000223725 2669 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm14219-201ENSMUST00000120414 288 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm9022-201ENSMUST00000182482 992 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm43186-201ENSMUST00000198130 824 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm25201-201ENSMUST00000083093 170 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm1E9Q9Q2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.1□□□□□ -0.31
R3hdm1E9Q9Q2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms