Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Gm6331-201ENSMUST00000217890 450 ntBASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 AC122035.1-201ENSMUST00000227576 1016 ntBASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Gm38344-201ENSMUST00000195306 1353 ntBASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Gm31274-201ENSMUST00000197356 229 ntBASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 CT030166.5-201ENSMUST00000222249 420 ntBASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hfm1D3Z4R1 Gm5308-201ENSMUST00000196752 1354 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Snord23-201ENSMUST00000116828 109 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm16459-201ENSMUST00000121443 686 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm17221-201ENSMUST00000163909 481 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm17073-201ENSMUST00000168069 556 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm38314-201ENSMUST00000195709 625 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm42511-201ENSMUST00000196160 234 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm44814-201ENSMUST00000207018 434 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Gm18065-201ENSMUST00000221395 526 ntBASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hfm1D3Z4R1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Gm25569-201ENSMUST00000157175 131 ntBASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Gm7939-201ENSMUST00000201233 1050 ntBASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 BC080696-201ENSMUST00000202858 1218 ntBASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 AC169511.1-201ENSMUST00000227639 995 ntBASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 AC154589.2-201ENSMUST00000228847 251 ntBASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 189.2 ms