Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm3508-201ENSMUST00000186012 792 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm45398-201ENSMUST00000210561 165 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.36□□□□□ -0.43
Scn1aA2APX8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.36□□□□□ -0.43
Scn1aA2APX8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm42997-202ENSMUST00000200321 985 ntBASIC12.36□□□□□ -0.43
Scn1aA2APX8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.36□□□□□ -0.43
Scn1aA2APX8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1aA2APX8 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm12208-201ENSMUST00000122004 163 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm10254-201ENSMUST00000052888 867 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm10179-201ENSMUST00000086233 688 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms