Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm22133-201ENSMUST00000102082 109 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm26361-201ENSMUST00000158868 186 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm17376-201ENSMUST00000166016 84 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm7584-201ENSMUST00000175829 940 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm25890-201ENSMUST00000177643 165 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm22614-201ENSMUST00000178300 165 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm9192-201ENSMUST00000183221 985 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm22042-201ENSMUST00000082989 165 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm26110-201ENSMUST00000083971 165 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Gm15004-201ENSMUST00000119192 630 ntBASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Gm11660-201ENSMUST00000120955 412 ntBASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.86□□□□□ -0.51
H2afb2S4R1M3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb2S4R1M3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms