Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smarcb1Q9Z0H3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcb1Q9Z0H3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcb1Q9Z0H3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcb1Q9Z0H3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcb1Q9Z0H3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcb1Q9Z0H3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm12029-201ENSMUST00000120073 832 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm45113-201ENSMUST00000207518 165 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcb1Q9Z0H3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Gm14460-201ENSMUST00000121511 639 ntBASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms