Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atp6ap1Q9R1Q9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atp6ap1Q9R1Q9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atp6ap1Q9R1Q9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Atp6ap1Q9R1Q9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.63□□□□□ -0.55
Atp6ap1Q9R1Q9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atp6ap1Q9R1Q9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm43184-201ENSMUST00000197247 542 ntBASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm9257-201ENSMUST00000221254 232 ntBASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Pck2-205ENSMUST00000226352 2784 ntBASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm6114-201ENSMUST00000182472 968 ntBASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm18212-201ENSMUST00000211678 889 ntBASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atp6ap1Q9R1Q9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms