Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm11989-201ENSMUST00000117240 672 ntBASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm11362-201ENSMUST00000118838 850 ntBASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 AC125539.1-201ENSMUST00000227423 622 ntBASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 AC102523.2-201ENSMUST00000227813 983 ntBASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf40aQ9R1C7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm13296-201ENSMUST00000117854 997 ntBASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm44967-201ENSMUST00000207047 631 ntBASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.12□□□□□ -0.31
Prpf40aQ9R1C7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms