Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Gm6450-201ENSMUST00000200896 574 ntBASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Gm35960-201ENSMUST00000202712 767 ntBASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf3Q9QXK7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm8815-201ENSMUST00000173809 620 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Mir3102-201ENSMUST00000175555 104 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm5714-201ENSMUST00000197343 566 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm9555-201ENSMUST00000200908 583 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm6867-201ENSMUST00000219165 425 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.75□□□□□ -0.37
Cpsf3Q9QXK7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm13045-201ENSMUST00000119019 712 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm23699-201ENSMUST00000158835 135 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm37246-201ENSMUST00000192665 835 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Gm43138-201ENSMUST00000199123 708 ntBASIC12.74□□□□□ -0.37
Cpsf3Q9QXK7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms