Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm4909-201ENSMUST00000118749 794 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm12501-201ENSMUST00000119163 529 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm11450-201ENSMUST00000121144 333 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm18734-201ENSMUST00000172937 808 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm5714-201ENSMUST00000197343 566 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Rps4l-202ENSMUST00000204242 789 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm45575-201ENSMUST00000210283 548 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm7940-201ENSMUST00000218195 769 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upk3aQ9JKX8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gm23085-201ENSMUST00000157849 293 ntBASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gm8815-201ENSMUST00000173809 620 ntBASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gm25732-201ENSMUST00000175168 60 ntBASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gm10288-201ENSMUST00000084614 537 ntBASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Upk3aQ9JKX8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms