Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm16505-201ENSMUST00000179981 232 ntBASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm27341-201ENSMUST00000183570 106 ntBASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm44262-201ENSMUST00000204969 372 ntBASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb3Q9ERD7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Mir5132-201ENSMUST00000175166 71 ntBASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Mir7070-201ENSMUST00000183657 86 ntBASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Gm44958-201ENSMUST00000203734 736 ntBASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb3Q9ERD7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms