Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.6■□□□□ 0.09
U2af1Q9D883 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Gm6867-201ENSMUST00000219165 425 ntBASIC15.6■□□□□ 0.09
U2af1Q9D883 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Ginm1-202ENSMUST00000065124 300 ntBASIC15.6■□□□□ 0.09
U2af1Q9D883 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
U2af1Q9D883 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
U2af1Q9D883 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
U2af1Q9D883 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Gm15595-201ENSMUST00000120840 961 ntBASIC15.59■□□□□ 0.09
U2af1Q9D883 Gm13263-201ENSMUST00000121271 838 ntBASIC15.59■□□□□ 0.09
U2af1Q9D883 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.59■□□□□ 0.09
U2af1Q9D883 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.59■□□□□ 0.09
U2af1Q9D883 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
U2af1Q9D883 Gm6114-201ENSMUST00000182472 968 ntBASIC15.59■□□□□ 0.09
U2af1Q9D883 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
U2af1Q9D883 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.59■□□□□ 0.09
U2af1Q9D883 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.59■□□□□ 0.09
U2af1Q9D883 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
U2af1Q9D883 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.59■□□□□ 0.09
U2af1Q9D883 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.59■□□□□ 0.09
U2af1Q9D883 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.59■□□□□ 0.09
U2af1Q9D883 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
U2af1Q9D883 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
U2af1Q9D883 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
U2af1Q9D883 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
U2af1Q9D883 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
U2af1Q9D883 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
U2af1Q9D883 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
U2af1Q9D883 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.58■□□□□ 0.09
U2af1Q9D883 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
U2af1Q9D883 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm12579-201ENSMUST00000118040 783 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm10051-201ENSMUST00000145209 414 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.58■□□□□ 0.08
U2af1Q9D883 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm28937-201ENSMUST00000185413 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm29400-201ENSMUST00000187208 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm28662-201ENSMUST00000188446 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm28251-201ENSMUST00000188835 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm37318-201ENSMUST00000194325 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm38017-201ENSMUST00000194768 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm37287-201ENSMUST00000195449 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm37793-201ENSMUST00000195548 695 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm42997-202ENSMUST00000200321 985 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm3786-201ENSMUST00000202659 378 ntBASIC15.58■□□□□ 0.08
U2af1Q9D883 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
U2af1Q9D883 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
U2af1Q9D883 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms