Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp5Q9D7S9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Mir1247-201ENSMUST00000116706 82 ntBASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Gm5419-201ENSMUST00000119301 527 ntBASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp5Q9D7S9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm10434-201ENSMUST00000101158 471 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm11700-201ENSMUST00000119409 403 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm17150-201ENSMUST00000165577 381 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm6266-201ENSMUST00000203844 806 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Gm5859-201ENSMUST00000165401 2324 ntBASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp5Q9D7S9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Erich3-203ENSMUST00000189969 3460 ntBASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Gm6023-201ENSMUST00000118217 606 ntBASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Gm7722-201ENSMUST00000120646 741 ntBASIC14.79□□□□□ -0.04
Chmp5Q9D7S9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms