Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Stag1Q9D3E6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Stag1Q9D3E6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm16071-201ENSMUST00000119589 793 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm18367-201ENSMUST00000176139 600 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm21092-201ENSMUST00000178995 955 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Mir7076-201ENSMUST00000183519 74 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm17826-201ENSMUST00000189720 798 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm9645-201ENSMUST00000197131 792 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm44980-201ENSMUST00000205826 314 ntBASIC14.16□□□□□ -0.14
Stag1Q9D3E6 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Stag1Q9D3E6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm22138-201ENSMUST00000158748 128 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm6485-201ENSMUST00000160676 439 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm9358-201ENSMUST00000183067 927 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm44506-201ENSMUST00000206278 965 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm7600-201ENSMUST00000209657 785 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Stag1Q9D3E6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Stag1Q9D3E6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Gm11783-201ENSMUST00000119549 885 ntBASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Gm12036-201ENSMUST00000120008 530 ntBASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Gm8194-201ENSMUST00000159783 859 ntBASIC14.14□□□□□ -0.15
Stag1Q9D3E6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Stag1Q9D3E6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms