Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Shmt2Q9CZN7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm4034-201ENSMUST00000187674 480 ntBASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm13097-201ENSMUST00000210722 397 ntBASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt2Q9CZN7 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm15276-201ENSMUST00000145953 498 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm26083-201ENSMUST00000157904 193 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm42937-201ENSMUST00000197360 752 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms