Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm24845-201ENSMUST00000158034 109 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm19994-201ENSMUST00000217086 586 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm25857-201ENSMUST00000082788 129 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.22□□□□□ -0.45
Snf8Q9CZ28 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Snf8Q9CZ28 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Gm5419-201ENSMUST00000119301 527 ntBASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Gm12164-201ENSMUST00000121695 551 ntBASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snf8Q9CZ28 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Snf8Q9CZ28 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm6023-201ENSMUST00000118217 606 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm6114-201ENSMUST00000182472 968 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm18062-201ENSMUST00000208020 547 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm18055-201ENSMUST00000208254 547 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms