Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.77□□□□□ -0.52
Ssu72Q9CY97 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Gm25043-201ENSMUST00000158604 212 ntBASIC11.77□□□□□ -0.53
Ssu72Q9CY97 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.77□□□□□ -0.53
Ssu72Q9CY97 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ssu72Q9CY97 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Gm14716-201ENSMUST00000120138 718 ntBASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ssu72Q9CY97 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms