Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mir6941-201ENSMUST00000184711 59 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm25053-202ENSMUST00000199731 132 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm43671-201ENSMUST00000200422 433 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldnd1Q9CQX5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Gm10807-201ENSMUST00000177134 795 ntBASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Trav11n-201ENSMUST00000200113 343 ntBASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldnd1Q9CQX5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm12712-201ENSMUST00000120676 801 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm17192-201ENSMUST00000169031 511 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm9081-201ENSMUST00000182346 991 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm43163-201ENSMUST00000196571 442 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm39288-201ENSMUST00000210554 446 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms