Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm13284-201ENSMUST00000121020 547 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm5529-201ENSMUST00000165691 891 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm43564-201ENSMUST00000196185 211 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm43117-201ENSMUST00000198531 379 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Mir453-201ENSMUST00000104732 82 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm11993-201ENSMUST00000121861 820 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm18124-201ENSMUST00000210695 706 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm4943-201ENSMUST00000132879 424 ntBASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdh23Q99PF4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm15329-201ENSMUST00000121408 155 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm8601-201ENSMUST00000182096 909 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm28937-201ENSMUST00000185413 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm29400-201ENSMUST00000187208 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm28662-201ENSMUST00000188446 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm28251-201ENSMUST00000188835 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm37318-201ENSMUST00000194325 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm38017-201ENSMUST00000194768 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm37287-201ENSMUST00000195449 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm37793-201ENSMUST00000195548 695 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms