Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm7046-201ENSMUST00000221351 977 ntBASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Gm11793-201ENSMUST00000120433 981 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Gm13786-201ENSMUST00000122371 333 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Gm18187-201ENSMUST00000196476 984 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Gm18893-201ENSMUST00000198416 943 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap3Q99LM2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm6013-201ENSMUST00000212264 699 ntBASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm45880-201ENSMUST00000213041 853 ntBASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms