Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm11989-201ENSMUST00000117240 672 ntBASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm11362-201ENSMUST00000118838 850 ntBASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm7722-201ENSMUST00000120646 741 ntBASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm19187-201ENSMUST00000206781 892 ntBASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm21769-201ENSMUST00000211922 111 ntBASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cstf3Q99LI7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm14726-201ENSMUST00000120623 896 ntBASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm6621-201ENSMUST00000193251 772 ntBASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm31256-201ENSMUST00000194705 506 ntBASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm9368-201ENSMUST00000219348 831 ntBASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cstf3Q99LI7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.48□□□□□ -0.57
Cstf3Q99LI7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm23270-201ENSMUST00000104055 131 ntBASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm11930-201ENSMUST00000117788 190 ntBASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms