Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd2Q99JR8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12□□□□□ -0.49
Smarcd2Q99JR8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd2Q99JR8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd2Q99JR8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd2Q99JR8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd2Q99JR8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm25063-201ENSMUST00000104666 94 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm15615-201ENSMUST00000118876 198 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm12036-201ENSMUST00000120008 530 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm11244-201ENSMUST00000121243 237 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm6407-201ENSMUST00000176468 549 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd2Q99JR8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gm14219-201ENSMUST00000120414 288 ntBASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gm15744-201ENSMUST00000161734 213 ntBASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gm6114-201ENSMUST00000182472 968 ntBASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gm45120-201ENSMUST00000208880 408 ntBASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd2Q99JR8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd2Q99JR8 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd2Q99JR8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd2Q99JR8 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.97□□□□□ -0.49
Smarcd2Q99JR8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Smarcd2Q99JR8 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd2Q99JR8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd2Q99JR8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms