Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Clip1Q922J3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Gm25063-201ENSMUST00000104666 94 ntBASIC18.49■□□□□ 0.55
Clip1Q922J3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Clip1Q922J3 Gm12990-201ENSMUST00000120372 468 ntBASIC18.49■□□□□ 0.55
Clip1Q922J3 Gm14395-201ENSMUST00000120494 563 ntBASIC18.49■□□□□ 0.55
Clip1Q922J3 Gm17798-201ENSMUST00000182282 1035 ntBASIC18.49■□□□□ 0.55
Clip1Q922J3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC18.49■□□□□ 0.55
Clip1Q922J3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC18.49■□□□□ 0.55
Clip1Q922J3 AC122346.3-201ENSMUST00000223983 306 ntBASIC18.49■□□□□ 0.55
Clip1Q922J3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Clip1Q922J3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip1Q922J3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm45003-201ENSMUST00000205875 2158 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm11960-201ENSMUST00000122068 925 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC18.48■□□□□ 0.55
Clip1Q922J3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Clip1Q922J3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC18.48■□□□□ 0.55
Clip1Q922J3 AC114645.1-201ENSMUST00000215831 187 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 Gm9139-201ENSMUST00000218817 700 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 AC165154.1-201ENSMUST00000226661 340 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip1Q922J3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC18.48■□□□□ 0.55
Clip1Q922J3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Clip1Q922J3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Gm25880-201ENSMUST00000104331 132 ntBASIC18.47■□□□□ 0.55
Clip1Q922J3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Clip1Q922J3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clip1Q922J3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip1Q922J3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Clip1Q922J3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clip1Q922J3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm12247-201ENSMUST00000117585 670 ntBASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm15374-201ENSMUST00000119313 844 ntBASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm12030-201ENSMUST00000121917 223 ntBASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC18.46■□□□□ 0.55
Clip1Q922J3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC18.46■□□□□ 0.55
Clip1Q922J3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm3017-201ENSMUST00000203603 1126 ntBASIC18.46■□□□□ 0.55
Clip1Q922J3 Gm45120-201ENSMUST00000208880 408 ntBASIC18.46■□□□□ 0.55
Clip1Q922J3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Clip1Q922J3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip1Q922J3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms