Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm22133-201ENSMUST00000102082 109 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm11439-201ENSMUST00000118598 409 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Gm18730-201ENSMUST00000218038 343 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdha3Q91Y16 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Gm12164-201ENSMUST00000121695 551 ntBASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdha3Q91Y16 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Gm24990-201ENSMUST00000157406 323 ntBASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Gm24749-201ENSMUST00000157838 343 ntBASIC12.44□□□□□ -0.42
Pcdha3Q91Y16 Gm5616-201ENSMUST00000165252 384 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms