Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm11358-201ENSMUST00000122310 373 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm13316-201ENSMUST00000140537 691 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm43005-201ENSMUST00000199015 648 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm44156-201ENSMUST00000203885 1189 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm18268-201ENSMUST00000208445 943 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Morn2-202ENSMUST00000227729 656 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm14723-201ENSMUST00000118686 215 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm15077-201ENSMUST00000122344 362 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm6536-201ENSMUST00000171180 615 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Mir8109-201ENSMUST00000184375 117 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Mir6420-201ENSMUST00000185032 102 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm42857-201ENSMUST00000200823 339 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm44706-201ENSMUST00000206822 815 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 AC113305.1-201ENSMUST00000214664 724 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 AL929417.1-201ENSMUST00000214901 124 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Gm22058-201ENSMUST00000083393 310 ntBASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb20Q91XZ9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms