Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm5705-201ENSMUST00000066241 711 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm15004-201ENSMUST00000119192 630 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm8185-201ENSMUST00000160999 669 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm18734-201ENSMUST00000172937 808 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp3Q91W36 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.38□□□□□ -0.43
Usp3Q91W36 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp3Q91W36 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm15937-201ENSMUST00000120727 1235 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp3Q91W36 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm18827-201ENSMUST00000188341 790 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm7848-201ENSMUST00000210739 718 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 AC154424.1-201ENSMUST00000225883 799 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp3Q91W36 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.37□□□□□ -0.43
Usp3Q91W36 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Usp3Q91W36 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp3Q91W36 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Usp3Q91W36 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms