Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm14999-201ENSMUST00000121039 624 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm6621-201ENSMUST00000193251 772 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm44882-201ENSMUST00000205702 802 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm10076-201ENSMUST00000073238 384 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rnf8Q8VC56 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm12314-201ENSMUST00000118104 538 ntBASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm20482-202ENSMUST00000174729 825 ntBASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Mir8109-201ENSMUST00000184375 117 ntBASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm27320-201ENSMUST00000184892 109 ntBASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf8Q8VC56 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms