Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm12058-201ENSMUST00000118614 437 ntBASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm6745-201ENSMUST00000199216 526 ntBASIC9.67□□□□□ -0.86
Nup35Q8R4R6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Gm16177-201ENSMUST00000120728 718 ntBASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Gm7809-201ENSMUST00000153199 742 ntBASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Gm3890-201ENSMUST00000182416 207 ntBASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.66□□□□□ -0.86
Nup35Q8R4R6 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup35Q8R4R6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.65□□□□□ -0.86
Nup35Q8R4R6 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup35Q8R4R6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup35Q8R4R6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.65□□□□□ -0.86
Nup35Q8R4R6 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nup35Q8R4R6 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nup35Q8R4R6 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms