Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Cd109Q8R422 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cd109Q8R422 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC16.7■□□□□ 0.26
Cd109Q8R422 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cd109Q8R422 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cd109Q8R422 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC16.7■□□□□ 0.26
Cd109Q8R422 Gm43163-201ENSMUST00000196571 442 ntBASIC16.7■□□□□ 0.26
Cd109Q8R422 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Cd109Q8R422 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC16.7■□□□□ 0.26
Cd109Q8R422 Ap3s1-202ENSMUST00000224622 978 ntBASIC16.7■□□□□ 0.26
Cd109Q8R422 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cd109Q8R422 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd109Q8R422 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cd109Q8R422 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cd109Q8R422 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.69■□□□□ 0.26
Cd109Q8R422 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cd109Q8R422 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC16.69■□□□□ 0.26
Cd109Q8R422 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cd109Q8R422 Gm15329-201ENSMUST00000121408 155 ntBASIC16.69■□□□□ 0.26
Cd109Q8R422 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC16.69■□□□□ 0.26
Cd109Q8R422 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC16.69■□□□□ 0.26
Cd109Q8R422 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC16.69■□□□□ 0.26
Cd109Q8R422 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Gm18968-201ENSMUST00000221319 862 ntBASIC16.69■□□□□ 0.26
Cd109Q8R422 AC129308.3-201ENSMUST00000225652 524 ntBASIC16.69■□□□□ 0.26
Cd109Q8R422 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd109Q8R422 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Cd109Q8R422 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC16.68■□□□□ 0.26
Cd109Q8R422 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cd109Q8R422 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm18986-201ENSMUST00000216029 1986 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cd109Q8R422 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm43773-201ENSMUST00000198548 2162 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm17709-201ENSMUST00000174536 1096 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm23694-201ENSMUST00000179335 110 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 AC124457.1-201ENSMUST00000198845 120 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm43380-201ENSMUST00000200421 220 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm18065-201ENSMUST00000221395 526 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 AC164618.2-201ENSMUST00000224770 573 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm5468-202ENSMUST00000227851 682 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.68■□□□□ 0.26
Cd109Q8R422 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cd109Q8R422 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd109Q8R422 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms