Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Gm12058-201ENSMUST00000118614 437 ntBASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Gm15610-201ENSMUST00000120584 195 ntBASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Gm6222-202ENSMUST00000182143 629 ntBASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nudcd3Q8R1N4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Gm17931-201ENSMUST00000208132 634 ntBASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nudcd3Q8R1N4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.83□□□□□ -0.51
Nudcd3Q8R1N4 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nudcd3Q8R1N4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nudcd3Q8R1N4 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.83□□□□□ -0.51
Nudcd3Q8R1N4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nudcd3Q8R1N4 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.83□□□□□ -0.52
Nudcd3Q8R1N4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms