Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm8213-201ENSMUST00000118191 441 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm13492-201ENSMUST00000119772 665 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm8810-201ENSMUST00000172895 754 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm38671-201ENSMUST00000200573 130 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm17931-201ENSMUST00000208132 634 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm807-202ENSMUST00000224929 408 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Ebf4Q8K4J2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm23912-201ENSMUST00000104687 87 ntBASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm39404-201ENSMUST00000216350 313 ntBASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm5186-201ENSMUST00000218781 920 ntBASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms