Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Clrn1Q8K445 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Rgr-203ENSMUST00000225070 4704 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm13996-201ENSMUST00000118456 430 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm45433-201ENSMUST00000209386 247 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm17827-201ENSMUST00000211825 742 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.2□□□□□ -0.62
Clrn1Q8K445 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.2□□□□□ -0.62
Clrn1Q8K445 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.19□□□□□ -0.62
Clrn1Q8K445 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.19□□□□□ -0.62
Clrn1Q8K445 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clrn1Q8K445 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms