Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm14109-201ENSMUST00000118814 309 ntBASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm2991-201ENSMUST00000173338 480 ntBASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm27046-201ENSMUST00000182160 463 ntBASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm9192-201ENSMUST00000183221 985 ntBASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm19287-201ENSMUST00000203190 358 ntBASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Gm45598-202ENSMUST00000210719 986 ntBASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cchcr1Q8K2I2 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cchcr1Q8K2I2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Gm8885-201ENSMUST00000189382 598 ntBASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Gm7399-201ENSMUST00000032395 858 ntBASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms