Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.41□□□□□ -0.26
Syne4Q8CII8 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Gm18968-201ENSMUST00000221319 862 ntBASIC13.41□□□□□ -0.26
Syne4Q8CII8 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.41□□□□□ -0.26
Syne4Q8CII8 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.41□□□□□ -0.26
Syne4Q8CII8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syne4Q8CII8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm8451-201ENSMUST00000170338 447 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm9192-201ENSMUST00000183221 985 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm43380-201ENSMUST00000200421 220 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm30671-201ENSMUST00000214898 318 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm7536-201ENSMUST00000077389 444 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm5453-201ENSMUST00000080866 447 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm10263-201ENSMUST00000085163 300 ntBASIC13.4□□□□□ -0.26
Syne4Q8CII8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.4□□□□□ -0.26
Syne4Q8CII8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syne4Q8CII8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Syne4Q8CII8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Syne4Q8CII8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Syne4Q8CII8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms