Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm9022-201ENSMUST00000182482 992 ntBASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm37666-201ENSMUST00000194110 866 ntBASIC12.18□□□□□ -0.46
CopaQ8CIE6 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm17812-201ENSMUST00000204935 318 ntBASIC12.18□□□□□ -0.46
CopaQ8CIE6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.18□□□□□ -0.46
CopaQ8CIE6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.17□□□□□ -0.46
CopaQ8CIE6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.17□□□□□ -0.46
CopaQ8CIE6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.17□□□□□ -0.46
CopaQ8CIE6 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.17□□□□□ -0.46
CopaQ8CIE6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.17□□□□□ -0.46
CopaQ8CIE6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.17□□□□□ -0.46
CopaQ8CIE6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopaQ8CIE6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Gm24231-201ENSMUST00000104315 133 ntBASIC12.16□□□□□ -0.46
CopaQ8CIE6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Gm9083-201ENSMUST00000120423 819 ntBASIC12.16□□□□□ -0.46
CopaQ8CIE6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.16□□□□□ -0.46
CopaQ8CIE6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms