Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Zc3h3Q8CHP0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zc3h3Q8CHP0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Zc3h3Q8CHP0 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Zc3h3Q8CHP0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Zc3h3Q8CHP0 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm23612-201ENSMUST00000103823 110 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm14497-201ENSMUST00000119537 580 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm14395-201ENSMUST00000120494 563 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm11993-201ENSMUST00000121861 820 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm23576-201ENSMUST00000179918 110 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm7627-201ENSMUST00000183205 999 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm28937-201ENSMUST00000185413 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm29400-201ENSMUST00000187208 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm28662-201ENSMUST00000188446 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm28251-201ENSMUST00000188835 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm8384-201ENSMUST00000190905 704 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm37318-201ENSMUST00000194325 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm38017-201ENSMUST00000194768 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm37287-201ENSMUST00000195449 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm37793-201ENSMUST00000195548 695 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm7238-201ENSMUST00000206467 973 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm9204-201ENSMUST00000212641 947 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm6331-201ENSMUST00000217890 450 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Zc3h3Q8CHP0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm23745-201ENSMUST00000104230 125 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm5395-201ENSMUST00000121650 915 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm29808-201ENSMUST00000194419 468 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm8768-201ENSMUST00000220020 826 ntBASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Zc3h3Q8CHP0 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms