Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gm5419-201ENSMUST00000119301 527 ntBASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.04□□□□□ -0.16
Rbm28Q8CGC6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Gm28686-201ENSMUST00000187404 609 ntBASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Gm5051-201ENSMUST00000204085 485 ntBASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Gm9797-202ENSMUST00000218003 294 ntBASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.03□□□□□ -0.16
Rbm28Q8CGC6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbm28Q8CGC6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbm28Q8CGC6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms