Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.63□□□□□ -0.07
Smc5Q8CG46 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Gm11511-201ENSMUST00000118146 540 ntBASIC14.63□□□□□ -0.07
Smc5Q8CG46 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Gm37424-201ENSMUST00000191727 561 ntBASIC14.63□□□□□ -0.07
Smc5Q8CG46 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Gm5455-201ENSMUST00000058710 715 ntBASIC14.63□□□□□ -0.07
Smc5Q8CG46 Gm10312-201ENSMUST00000078515 489 ntBASIC14.63□□□□□ -0.07
Smc5Q8CG46 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc5Q8CG46 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.63□□□□□ -0.07
Smc5Q8CG46 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.62□□□□□ -0.07
Smc5Q8CG46 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Gm6963-201ENSMUST00000147879 379 ntBASIC14.62□□□□□ -0.07
Smc5Q8CG46 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Gm45880-201ENSMUST00000213041 853 ntBASIC14.62□□□□□ -0.07
Smc5Q8CG46 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.62□□□□□ -0.07
Smc5Q8CG46 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.62□□□□□ -0.07
Smc5Q8CG46 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc5Q8CG46 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc5Q8CG46 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms