Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Gm27892-201ENSMUST00000185017 106 ntBASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Gm6180-201ENSMUST00000065243 498 ntBASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28bQ8CEG5 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gm5866-201ENSMUST00000177881 973 ntBASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gm42693-201ENSMUST00000196779 631 ntBASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms